Publications by Centre Staff - 2009
48.
(2009)
The pentatricopeptide repeat protein OTP82 is required for RNA editing of plastid ndhB and ndhG transcripts
The Plant Journal
(in press)
PUBMED
Impact Factor: 6.5
47.
(2009)
Human DNA methylomes at base resolution show widespread epigenomic differences
Nature
(in press)
PUBMED
doi:10.1038/nature08514
Impact Factor: 31.4
46.
(2009)
A study of new Arabidopsis chloroplast RNA editing mutants reveals general features of editing factors and their target sites Plant Cell
Plant Cell
(in press)
PUBMED
Impact Factor: 11
45.
(2009)
Transcriptional control of SET DOMAIN GROUP 8 and CAROTENOID ISOMERASE during Arabidopsis development
Molecular Plant
(in press)
PUBMED
Impact Factor: unknown
44.
(2009)
Hypoxia responsive MicroRNAs and trans-acting small interfering RNAs
Journal of Experimental Botany
(in press)
PUBMED
Impact Factor: 4
43.
(2009)
Catalytically-inactive β-amylase BAM4 required for starch breakdown in Arabidopsis leaves is a starch-binding-protein
Archives of Biochemistry and Biophysics
489(1-2):92-8
PUBMED
Impact Factor: 2.626
42.
(2009)
Remodeled respiration in ndusf4 with low phosphorylation efficiency suppresses Arabidopsis germination and growth and alters control of metabolism at night
Plant Physiology
Oct;151(2):603-19.
PUBMED
Impact Factor: 6
41.
(2009)
Phage-Type RNA Polymerase RPOTmp Performs Gene-Specific Transcription in Mitochondria of Arabidopsis thaliana
Plant Cell
Sep;21(9):2762-79
PUBMED
Impact Factor: 11
40.
(2009)
Defining the Mitochondrial Stress Response in Arabidopsis thaliana
Molecular Plant
(in press)
PUBMED
Impact Factor: unknown
39.
(2009)
Physiological and transcriptome analysis of iron and phosphorus interaction in rice seedlings
Plant Physiology
151(1):262-74
PUBMED
Impact Factor: 6
38.
(Sep 2009)
Pentatricopeptide repeat domain protein 1 lowers the levels of mitochondrial leucine tRNAs in cells
Nucleic Acids Research
37(17):5859-67
PUBMED
Impact Factor: 8
37.
(2009)
Defining core metabolic and transcriptomic responses to oxygen availability in rice embryos and young seedlings
Plant Physiology
Sep;151(1):306-22
PUBMED
Impact Factor: 6
36.
Aug. 2009
The multiple roles of light-harvesting chlorophyll a.b-protein complexes define structure and optimize function of Arabidopsis chloroplasts: a study using two chlorophyll b-less mutants
Biochimica et Biophysica Acta - Bioenergetics
1787: 973-984
PUBMED
Impact Factor: 4
35.
(2009)
Identifying chloroplast biogenesis and signalling mutants in Arabidopsis thaliana
In: Photosyn. Research Protocols (in press)
34.
(2009)
Albinism in plants: a major bottleneck in wide hybridization, androgenesis and doubled haploid culture
Critical Reviews in Plant Sciences
(in press)
PUBMED
Impact Factor: 3
33.
(2009)
A survey of the Arabidopsis thaliana mitochondrial phosphoproteome Proteomics
Proteomics
9(17):4229-4240
PUBMED
32.
(2009)
Insights into female sperm storage from the spermathecal fluid proteome of the honeybee Apis mellifera
Genome Biology
10(6):R67
PUBMED
Impact Factor: 10
31.
(2009)
Arabidopsis tRNA adenosine deaminase (TADA) is responsible for editing the wobble nucleotide of chloroplast tRNAArg(ACG), a modification essential for efficient chloroplast translation
Plant Cell
21(7):2058-71
PUBMED
Impact Factor: 11
30.
(2009)
Proteomic identification of extracellular proteins regulated by the Gna1 Gα subunit in Stagonospora nodorum
Mycological Research
113:523-31
PUBMED
Impact Factor: 2
29.
(2009)
Biochemical evidence for translational repression by plant microRNAs
Plant Cell
21(6):1762-8
PUBMED
Impact Factor: 11
28.
(2009)
Pentatricopeptide repeat domain protein 3 associates with the mitochondrial small ribosomal subunit and regulates translation
FEBS Lett.
583(12):1853-8
PUBMED
Impact Factor: 3
27.
(2009)
Mitochondrial and nuclear localization of a novel pea thioredoxin: identification of its mitochondrial target proteins
Plant Physiology
150(2):646-57
PUBMED
Impact Factor: 6
26.
(2009)
Alternative oxidase: a target and regulator of stress responses
Physiologia Plantarum
(in press)
PUBMED
Impact Factor: 2
25.
(2009)
Refining the definition of plant mitochondrial presequences through analysis of sorting signals, N-terminal modifications and cleavage motifs
Plant Physiology
150(3):1272-85
PUBMED
Impact Factor: 6
24.
(2009)
The transcription factor ABI4 is a regulator of mitochondrial retrograde expression of Alternative oxidase 1a
Plant Physiology
150(3):1286-96
PUBMED
Impact Factor: 6
23.
(2009)
Exploring the function-location nexus: using multiple lines of evidence in defining the subcellular location of plant proteins
Plant Cell
21(6):1625-31
PUBMED
Impact Factor: 11
22.
(2009)
Histone acetylation, VERNALIZATION INSENSITIVE 3, FLOWERING LOCUS C and the vernalization response
Molecular Plant
2: 724-737
PUBMED
doi:10.1093/mp/ssp021
Impact Factor: unknown
21.
(2009)
VERNALIZATION INSENSITIVE 3 (VIN3) is required for the response of Arabidopsis thaliana seedlings exposed to low oxygen conditions
The Plant Journal
59(4):576-87
PUBMED
Impact Factor: 7
20.
Aug. 2009
Alternative splicing, activation of cryptic exons and amino acid substitutions in carotenoid biosynthetic genes are associated with lutein accumulation in wheat endosperm
Functional and Integrative Genomics
9(3):363-76.
PUBMED
Impact Factor: 4
19.
(2009)
Promoting gene expression in plants by permissive histone lysine methylation
Plant Signaling and Behavior
Jun;4(6):484-8.
PUBMED
Impact Factor: unknown
18.
(2009)
Biosynthesis and Regulation of Carotenoids in Plants- micronutrients, vitamins and health benefits
In: Plant Developmental Biology-Biotechnology Perspectives,
Eng Chong Pua (Ed.) Springer, Germany
17.
(2009)
Potential implications for epigenetic regulation of carotenoid biosynthesis during root and shoot development
Plant Signaling and Behavior
Apr;4(4):339-41
PUBMED
Impact Factor: unknown
16.
Apr. 2009
Chloroplast ribonucleoprotein CP31A is required for editing and stability of specific chloroplast mRNAs
Proceedings of the National Academy of Sciences USA
106(14):6002-7
PUBMED
Impact Factor: 10
15.
Jan 2009
Pentatricopeptide repeat proteins with the DYW motif have distinct molecular functions in RNA editing and RNA cleavage in Arabidopsis chloroplasts
Plant Cell
21(1):146-56
PUBMED
Impact Factor: 11
14.
(2009)
Regulation of Carotenoid Composition and Shoot Branching in Arabidopsis by a Chromatin Modifying Histone Methyltransferase, SDG8
Plant Cell
21(1): 39-53
PUBMED
Impact Factor: 11
13.
(2009)
De-novo Synthesis and Degradation of Lx- and V-cycle Pigments during Shade and Sun Acclimation in Avocado Leaves (P. americana)
Plant Physiology
149(2):1179-95
PUBMED
Impact Factor: 6
12.
(Mar. 2009)
Identification of two Arabidopsis genes encoding a peroxisomal oxidoreductase-like protein and an acyl:CoA transferase-like protein required for responses to pro-auxins
Plant Molecular Biology
69(5):503-515
PUBMED
Impact Factor: 3
11.
April 2009
The nucleotidase/phosphatase, SAL1, is a negative regulator of drought tolerance in Arabidopsis
The Plant Journal
58(2):299-317
PUBMED
Impact Factor: 7
10.
(Feb. 2009)
Long bugs to small plants — the role of Lon1 in protein stability and thermotolerance
New Phytologist
181: 505-508
PUBMED
Impact Factor: 5
9.
(Feb. 2009)
Mapping metabolic and transcript temporal switches during germination in
Oryza sativa highlights specific transcription factors and the role of
RNA instability in the germination process
Plant Physiology
149(2):961-80
PUBMED
Impact Factor: 6
8.
(March 2009)
Protein transport in organelles: Dual Targeting of Proteins to Mitochondria and Chloroplasts
FEBS Journal
(276(5):1187-95)
PUBMED
Impact Factor: 3
7.
(April 2009)
The Arabidopsis gene YS1 encoding a DYW protein is required for editing of rpoB transcripts and the rapid development of chloroplasts during early growth
The Plant Journal
58(1):82-96
PUBMED
Impact Factor: 7
6.
April 2009
The seminal fluid proteome of the honeybee Apis mellifera
Proteomics
9(8):2085-97.
PUBMED
Impact Factor: 6
5.
April 2009
The Arabidopsis glutathione transferase gene family displays complex stress regulation and co-silencing multiple genes results in altered metabolic sensitivity to oxidative stress
The Plant Journal
58(1):53-68
PUBMED
Impact Factor: 7
4.
Feb 2009
Experimental analysis of the rice mitochondrial proteome, its biogenesis and heterogeneity
Plant Physiology
149(2):719-34
PUBMED
Impact Factor: 6
3.
April 2009
Abiotic environmental stress induced changes in the Arabidopsis thaliana chloroplast, mitochondria and peroxisome proteomes
Journal of Proteomics
72(3):367-78
PUBMED
Impact Factor: 6
2.
2009
Approaches to Defining Dual-Targeted Proteins in Arabidopsis
The Plant Journal
57(6):1128-39
PUBMED
Impact Factor: 7
1.
2009
Differential response of poplar (P. x canescens) leaves and roots underpin stress adaptation during hypoxia
Plant Physiology
149(1):461-73
PUBMED
Impact Factor: 6
2009 Statistics (to date)
- 48 publications in 22 different journals
- No. Impact >5 <10: 20
- No. Impact Factor >=10: 11
- Average Impact Factor: 7.1 (284/40)
Publications by Centre Staff - 2008
40.
(2008)
When is a peroxisome not a peroxisome?
Trends in Plant Sci.
3, 522-525
PUBMED
Impact Factor: 10
39.
(2008)
Peroxisomal malate dehydrogenase is not essential for photorespiration in Arabidopsis but its absence causes an increase in the stoichiometry of photorespiratory CO2 release
Plant Physiology
148(2):786-95
PUBMED
Impact Factor: 6
38.
(2008)
Localization of sucrose synthase in developing seed and siliques of Arabidopsis thaliana reveals diverse roles for SUS during development
Impact Factor: 3
37.
2008
The absence of Alternative Oxidase 1a in Arabidopsis thaliana results in acute sensitivity to combined light and drought stress
Plant Physiology
147: 595-610
PUBMED
Impact Factor: 6
36.
2008
The multinational Arabidopsis steering subcommittee for proteomics assembles the largest proteome database resource for plant systems biology
Journal of Proteome Research
7:4209-10
PUBMED
Impact
Factor: 7
35.
Nov 2008
A rapid, non-invasive procedure for quantitative assessment of drought survival using chlorophyll fluorescence
Plant Methods
4(1):27
PUBMED
Impact
Factor: 2
34.
2008
Pentatricopeptide repeat proteins: a socket set for organelle gene expression
Trends in Plant Science
13:663-70
PUBMED
Impact Factor: 10
33.
(October 17, 2008)
Novel proteins, putative membrane transporters and an integrated metabolic network are revealed by quantitative proteomic analysis of Arabidopsis cell culture peroxisomes.
Plant Physiology
148:1809-29
PUBMED
Impact Factor: 6
32.
(2008)
Large-scale structural modeling of protein complexes at low resolution.
J Bioinform Comput Biol.
6(4):789-810.
PUBMED
Impact Factor: Unknown
31.
(Nov, 2008)
Complex I dysfunction redirects cellular and mitochondrial metabolism in Arabidopsis
Plant Physiology
148(3):1324-1341
PUBMED
Impact Factor: 6
30.
(Nov, 2008)
A signaling-regulated short-chain dehydrogenase of Stagonospora nodorum regulates asexual development.
Eukaryotic Cell
7(11):1916-1929
PUBMED
Impact Factor: 4
29.
(2008)
Type II NAD(P)H dehydrogenases are targeted to mitochondria and chloroplasts or peroxisomes in Arabidopsis thaliana.
FEBS Letters
582:3073-3079
PUBMED
Impact Factor: 3
28.
(Nov, 2008)
Plastid signalling to the nucleus and beyond.
Trends in Plant Science
13 (11): 602-609
PUBMED
Impact Factor: 10
27.
(Jul 23, 2008)
CLB19, a pentatricopeptide repeat protein required for editing of rpoA and clpP chloroplast transcripts.
The Plant Journal
56:590-602
PUBMED
Impact Factor: 7
26.
2008
Identification of regulatory pathways controlling gene expression of stress responsive mitochondrial proteins in Arabidopsis
Plant Physiology
147: 1858-1873
PUBMED
Impact Factor: 6
25.
(Oct, 2008)
The pentatricopeptide repeat gene OTP51 with two LAGLIDADG motifs is required for
the cis-splicing of plastid ycf3 intron 2 in Arabidopsis thaliana
The Plant Journal
56(1):157-68
PUBMED
Impact Factor: 7
24.
(June, 2008)
A Link between RNA Metabolism and Silencing Affecting Arabidopsis Development. Developmental Cell
14(6):854-866
PUBMED
Impact Factor: 15
23. (May 6, 2008) Dynamic changes in the mitochondrial electron transport chain underpinning cold acclimation of leaf respiration. Plant Cell & Environment
31: 1156-1169
PUBMED
Impact Factor: 4
22.
(June, 2008) On the expansion of the pentatricopeptide
repeat gene family in plants.
Molecular Biology and Evolution
25(6):1120-1128 PUBMED
Impact Factor: 7
21. (April
17, 2008) Highly Integrated Single-Base Resolution
Maps of the Epigenome in Arabidopsis Cell
133(3):523-36 PUBMED
Impact Factor: 29
20.
(Feb 28, 2008) Luciferase as a reporter of gene activity in plants.
Transgenic Plant Journal
2 (1): 1-13
PUBMED
Impact Factor: Unknown
19.
(May, 2008) Does anoxia tolerance
involve altering the energy currency towards PPi? Trends
in Plant Science 13(5):221-227
PUBMED
Impact Factor: 10
18. (April 2, 2008) Heterogeneity
of the mitochondrial proteome for photosynthetic and non-photosynthetic Arabidopsis
metabolism. Molecular & Cellular Proteomics
7(7):1297-316
PUBMED
Impact Factor: 10
17. Apr 2008
BETA-AMYLASE 4, a non-catalytic protein that regulates
leaf starch breakdown upstream of three active alpha-amylases in Arabidopsis
chloroplasts. Plant Cell 20(4):1040-58
PUBMED
Impact Factor 11.
16. (2008)
Impact of chloroplast- and extracellular-srouced ROS on
high light-responsive gene expression in Arabidopsis.
Journal of Experimental Botany59:121-133
59(2):121-33 PUBMED
Impact Factor: 3
15.
(2008)
Dynamics of the truncated lutein epoxide cycle in avocado
(Persea Americana L.); implications for efficiency of light harvesting
In:
Allen JF, Grantt E. Golbeck, JH
Osmond CB (eds) Photosynthesis. Energy from the Sun, Springer, Dordrecht
(2008) Vol 2: 1031-1034. ISBN 978-1-4020-6707-5 URL
14.
(2008) Heat
stress causes inhibition of the de novo synthesis of antenna proteins and
photobleaching in cultured Symbiodinium.
Proceedings of the National Academy of Sciences USA
105, 4203-4208.
PUBMED
Impact Factor 10
13. Feb (2008)
The contribution of photosynthesis to the red light response of stomatal conductance.
Plant Physiology 146,
737-747.
PUBMED
Impact Factor 6
12. (28
March, 2008) The effects of Rubisco activase on
C4 photosynthesis and metabolism at high temperature.
Journal of Experimental Botany59(7):1789-1798
PUBMED
Impact Factor 3
11. (2008). Multiple Rubisco forms
in Proteobacteria: their functional significance in relation to CO2
acquisition by the CBB cycle.
Journal of Experimental Botany
59(7):1525-1541.
PUBMED
Impact
Factor: 3
10. (2008). C4 photosynthetic
isotope exchange in NAD-ME and NADP-ME type grasses.
Journal of Experimental Botany. 59(7):1695-1703.
PUBMEDImpact Factor: 3
9. (2008)
Analysis of the Arabidopsis cytosolic ribosome proteome
provides detailed insights into its components and their post-translational
modification.
Molecular & Cellular Proteomics
7, 347-369 PUBMED
Impact Factor: 10
8. (2008) Resolving and
identifying protein components of plant mitochondrial respiratory complexes
using three dimensions of gel electrophoresis. Journal
of Proteome Research 7, 786-94
PUBMED
Impact
Factor: 7
7. Jan (2008). A
rapid, whole tissue determination of the functional fraction of photosystem
II after photoinhibition of leaves based on flash-induced P700 redox kinetics.
Physiologia Plantarum 132,
23-32.
PUBMED
Impact Factor: 2
6.
(2008). Large-scale characteristics of the energy
landscape in protein-protein interactions. Proteins-Structure
Function and Bioinformatics 71, 144-52 PUBMED
Impact Factor: 4
5. (2008). PhosPhAt: A
database of phosphorylation sites in Arabidopsis thaliana and a plant-specific
phosphorylation site predictor. Nucleic Acids Research.
36, D1015-1021 PUBMED
Impact Factor: 8
4. (2008) Isolation
of mitochondria from plant cell culture. In: 2D
PAGE: Sample preparation and fractionation, Methods in Molecular Biology,
Humana Press, USA. ISBN 978-1-60327-209-4 URL
Vol 425, pp 161-169
3. (Apr
15, 2008) Bioenergetic differences selectively sensitize tumorigenic
liver progenitor cells to a new gold(I) compound. Carcinogenesis. 29: 1124-1133 PUBMED
Impact Factor: 5
2.
(2008) Probing lipid
and drug binding domains with fluorescent dyes. Bioorganic
and Medicinal Chemistry 16, 1162-73. PUBMED
Impact Factor: 3
1. (2008). Advances in
understanding the cyanobacterial CO2-concentrating-mechanism (CCM):
functional components, Ci transporters, diversity, genetic regulation and prospects
for engineering into plants.
Journal of Experimental Botany
59(7):1441-61 PUBMED
Impact Factor: 3
2008 Statistics
- 40 publications in 23 different journals
- at least 31 in ISI listed Journals
- No. Impact >5 <10 > 13
- No. Impact Factor >=10 > 10
- Average Impact Factor = 6.9 (249/36)
Publications by Centre Staff - 2007
(2007)
An extra-plastidial alpha-glucan, water dikinase from Arabidopsis
phosphorylates amylopectin in vitro and is not necessary for transient starch
degradation. Journal of Experimental Botany
58, 3949-60. PUBMED
Impact Factor 3
(2007) Systemic and Intracellular
Response to Photooxidative stress in Arabidopsis. Plant
Cell 19, 4091-4110 PUBMED
Impact Factor: 11
(2007) Discrimination
in the Dark. Resolving the Interplay between Metabolic and Physical Constraints
to PEPC Activity during the CAM Cycle. Plant Physiology
143, 1055-67 PUBMED
Impact Factor: 6
(2007) A Quantitative
Assessment of the Carbonic Anhydrase Activity in Photosystem II. Biochemica
et Biophysica Acta Biomembranes. 1767, 639-647.
PUBMED
Impact Factor: 4
(2007)
Impairment of the photorespiratory
pathway accelerates photoinhibition of photosystem II by suppression of repair
and not acceleration of damage processes in Arabidopsis
thaliana.
Plant Physiology
144,
487-494.
PUBMED
Impact Factor: 6
(2007). Analysis
of carboxysomes from Synechococcus PCC7942 reveals multiple Rubisco complexes
with carboxysomal proteins CcmM & CcaA. Journal
of Biological Chemistry 282, 29323-35. PUBMED
Impact Factor: 6
(2007). The
role of phosphoenolpyruvate carboxylase (PEPC) during C4 photosynthetic isotope
exchange and stomatal conductance. Plant Physiology.
145, 1006-1017. PUBMED
Impact Factor: 6
(2007).
Differences in carbon isotope discrimination of three variant
Rubiscos reflect differences in their catalytic mechanism. Journal
of Biological Chemistry 282, 36068-36076 .
PUBMED
Impact Factor: 6
(2007)
Glucan, Water Dikinase Activity Stimulates Breakdown of Starch Granules by Plastidial
β-Amylases. Plant Physiology
145, 17-28 PUBMED
Impact Factor: 6
(2007) Genome-Wide Analysis of
mRNA Decay Rates and their Determinants in Arabidopsis thaliana. The
Plant Cell 19, 3418-3436 PUBMED
Impact Factor: 11
(2007) The cytotoxic lipid peroxidation product 4-hydroxy-2-nonenal
covalently modifies a selective range of proteins linked to respiratory function
in plant mitochondria. The Journal of Biological
Chemistry 282, 37436-37447 PUBMED
Impact Factor: 6
(2007) Advances
in Structural Biology and Structure Prediction. Current
Science 93, 755-757. Article
Impact Factor: 1
(2007)
Protein import into peroxisomes by ring-shaped import
receptors. FEBS Letters 581, 4795-4802 PUBMED
Impact Factor: 3
(2007)
Pentatricopeptide repeat (PPR) proteins as sequence-specificity
factors in post-transcriptional processes in organelles. Biochemical
Society Transactions 35, 1643-1647. PUBMED
Impact Factor: 3
(2007) High-resolution
structural analysis of mammalian profilin IIa complex formation with two physiological
ligands: the formin homology 1 domain of mDia1 and the proline-rich domain of
VASP. Journal of Molecular Biology 375,
270-90. PUBMED
Impact Factor: 5
(2007). The
Pentatricopeptide Repeat Gene OTP43 is Required for trans-Splicing of the Mitochondrial
nad1 Intron 1 in Arabidopsis thaliana. The Plant
Cell 19, 3256-3265 PUBMED
Impact Factor: 11
(2007) Functional Definition of Outer Membrane Proteins
Involved in Preprotein Import into Mitochondria. The
Plant Cell 19, 3739-3759 PUBMED
Impact Factor: 11
(2007). Differential gene expression and subcellular
targeting of Arabidopsis glutathione S-transferase F8 is achieved through alternative
transcription start sites. Journal of Biological
Chemistry 282, 28915-28928 PUBMED
Impact Factor: 6
(2007). Cloning
and characterisation of AtNUDT13, a novel mitochondrial Arabidopsis thaliana
Nudix hydrolase specific for long-chain diadenosine polyphosphates. FEBS
Journal 274, 4877-4855. PUBMED
Impact Factor: 3
(2007). Building
the Powerhouse. What are the signals involved in plant mitochondrial biogenesis.
Plant Signalling and Behaviour 2, 427-429. ABSTRACT
(2007). A
hypothesis on the identification of the editing enzyme in plant organelles.
FEBS Letters 581, 4132-8 PUBMED
Impact Factor: 3
(2007).
A rapid high-throughput method for the
detection and quantification of RNA editing based on high-resolution
melting of amplicons. Nucleic Acids Research
35, e114 PUBMED
Impact Factor: 8
(2007) A Predicted Interactome for Arabidopsis. Plant
Physiology 145, 317-29 PUBMED
Impact Factor: 6
(2007)
Identification of intra- and inter-molecular disulfide bonding
in the plant mitochondrial proteome by diagonal gel electrophoresis. Proteomics
7, 4158-70. PUBMED
Impact Factor: 6
(2007) Free Flow Electrophoresis for Purification
of Plant Mitochondria by Surface Charge. The Plant
Journal 52, 583-594 PUBMED
Impact Factor: 7
(2007). Plastid tRNA Genes trnC-GCA and trnN-GUU
are essential for plant cell development. The Plant
Journal 51, 751-62 PUBMED
Impact Factor: 7
(2007). Plant
biotechnology 2007: all three genomes make contributions to progress. Current
Opinion in Biotechnology, 18, 97-99. DOI
Abstract Impact Factor: 7
(2007). Pentatricopeptide repeat proteins in T.
brucei function in mitochondrial ribosomes.
Molecular and Cellular Biology
27, 6876-88 PUBMED
Impact Factor: 7
(2007). RNAi
for revealing and engineering plant gene functions. Current
Opinion in Biotechnology 18, 148-153. PUBMED
Impact Factor: 7.
(2007).
Import of nuclear-encoded mitochondrial proteins. In:
Plant Mitochondria, Logan, D.C. (ed.). Annual Plant
Reviews 31, Chapter 4, pp 97-128,
Blackwell Publishing Ltd, Oxford.
URL
(2007) Regulation of lutein biosynthesis and prolamellar
body formation in Arabidopsis. Functional Plant
Biology , 34, 663-672. Abstract
Impact Factor: 2
(2007) Oxygen initiation of respiration and mitochondrial
biogenesis in rice. Journal of Biological Chemistry
282, 15619-15631 PUBMED
Impact Factor: 6
(2007) Characterisation
of the Regulatory and Expression Context of an Alternative Oxidase Gene Provides
Insights into Cyanide Insensitive Respiration during Growth and Development.Plant
Physiology 143, 1519-33 PUBMED
Impact Factor: 6
(2007) Arabidopsis
peroxisomal malate dehydrogenase functions in beta-oxidation but not the glyoxylate
cycle. The Plant Journal 50, 381-390 PUBMED
Impact Factor: 7
(2007) Measurement
of (carbon) kinetic isotope effect by Rayleigh fractionation using membrane
inlet mass spectrometry for CO2 consuming reactions. Functional
Plant Biology 33, 1115-1128 PUBMED
Impact Factor: 2
(2007)
Quantification of cyclic electron flow around Photosystem
I in spinach leaves during photosynthetic induction. Photosynthesis
Research 94, 347-357 PUBMED
Impact Factor: 2
(2007) Mitochondrial
acyl carrier proteins in Arabidopsis thaliana are predominantly soluble matrix
proteins and none can be confirmed as subunits of respiratory Complex I.
Plant Molecular Biology
64, 319-327 PUBMED
Impact Factor: 3
(2007) Arabidopsis
Mitochondrial Proteomics. In: Mitochondria Practical
Protocols, Chapter 38 Methods in Molecular Biology Vol 372. Humana Press, pp
559-571. ISBN 978-1-59745-365-3 Abstract
(2007) Oxidative
Stress and Plant Mitochondria. In: Mitochondria Practical
Protocols, Chapter 28, Methods in Molecular Biology Vol 372. Humana Press, pp
389-403. ISBN 978-1-59745-365-3 Abstract
(2007) Characterisation
of the preprotein and amino acid transporter family in Arabidopsis. Plant
Physiology 143, 199-212 PUBMED
Impact Factor: 6
(2007) Nine
3-ketoacyl-CoA thiolases (KATs) and acetoacetyl-CoA thiolases (ACATs)
encoded by five genes in Arabidopsis thaliana are targeted either to
peroxisomes or cytosol but not to mitochondria.
Plant Molecular Biology
63:97-108. PUBMED
Impact Factor: 3
(2007) SUBA: The Arabidopsis Subcellular Database.
Nucleic Acids Research 35, D213-8. PUBMED
Impact Factor: 8
(2007) Plant Mitochondrial Transcriptomics by
Quantitative Real-Time PCR. In: Mitochondria Practical Protocols,
Chapter 36, Methods in Molecular Biology Vol 372, Humana Press
pp529-542. ISBN 978-1-59745-365-3
Abstract
(2007)
Isolation and Sub-Fractionation
of Mitochondria from Plants In: Methods in Cell Biology on Mitochondria,
Pon LA and Schon EA (Eds.) Academic Press, Inc. Vol 80, pp 66-87. ISBN 973-0-12-544173-5
URL
(2007) The diurnal metabolism
of leaf starch. Biochemical Journal 401:13-28. PUBMED
Impact Factor: 4
(2007) The plant
mitochondrial proteome and the challenge of defining the post-translational
modifications responsible for signaling and stress effects on respiratory functions.
Physiologia Plantarum 129, 207-224. Abstract
Impact Factor: 2
(2007) The multifarious
roles of PPR proteins in plant mitochondrial gene expression. Physiologia
Plantarum 129, 14-22. Abstract
Impact Factor: 2
2007 Statistics
- 48 publications in 25 different journals
- 42 in ISI listed Journals
- No. Impact >= 5 & < 10 = 23
- No. Impact >= 10 = 4
- Average Impact Factor = 5.5 (231/42)
Publications by Centre Staff - 2006
(2006) A
transgenic approach to understanding the influence of carbonic anhydrase on
C18OO discrimination during C4 photosynthesis. Plant
Physiology 142, 662-72 PUBMED
Impact Factor: 6
(2006) Plant Proteomics: Challenges and
Resources In: Plant Proteomics, Annual Plant Reviews, Christine Finnie
(Ed.) Blackwell Publishing, UK.
ISBN: 9781405144292
URL
(2006) Isolation and sub-fractionation of
plant mitochondria for proteomic analysis. In:
Plant Proteomics: Methods and Protocols Vol 355, Humana
Press, USA.pp 49-62 ISBN 978-1-58829-635-1
PUBMED
(2006) Recent
surprises in protein targeting to mitochondria and plastids. Current
Opinion in Plant Biology 9, 610-615 PUBMED
Impact Factor: 11
(2006) Analysis
of the soluble ATP-binding proteome of plant mitochondria identifies new proteins
and nucleotide triphosphate interactions within the matrix. Journal
of Proteome Research 5, 3459-69. PUBMED
Impact Factor: 7
(2006) Quantitative assessment of instrisic carbonic
anhydrase activity and the capacity for bicarbonate oxidation in photosystem
II. Biochemistry 45, 2094-2102 PUBMED
Impact Factor: 4
(2006) Carbonic
anhydrase and its influence on carbon isotope discrimination dur C4 photosynthesis:
Insights from antisense RNA in Flaveria bidentis. Plant
Physiology 141, 232-42 PUBMED
Impact Factor: 6
(2006) Desenitization of GSTF8 induction by a prior
chemical treatment is long lasting and operates in a tissue-dependent manner.
Plant Physiology 142, 245-53 PUBMED
Impact Factor: 6
(2006) Chromosomal
clustering of nuclear genes encoding mitochondrial and chloroplast proteins
in Arabidopsis.Trends in Genetics 22, 589-593
PUBMED
Impact Factor: 12
(2006) A
central role for the peroxisomal membrane in glyoxylate cycle function. Biochimica
et Biophysica Acta - Molecular Cell Research 1763, 1441-52 PUBMED
Impact Factor: 5
(2006) The
Crystal Structure of a Plant 3-Ketoacyl-CoA Thiolase Reveals the Potential for
Redox Control of Peroxisomal Fatty Acid beta-Oxidation. Journal
of Molecular Biology 359, 347-57. PUBMED
Impact Factor: 5
(2006)
Photoprotection of residual functional Photosystem
II units that survive illumination in the absence of repair, and their critical
role in subsequent recovery Physiologia Plantarum
128, 415-424. Abstract
Impact Factor: 2
(2006) Comparative
proteomics of high light stress in the model alga Chlamydomonas reinhardtii.Proteomics
6, 4309-20 PUBMED
Impact Factor: 6
(2006) Vitamin
synthesis in plants: tocopherols and carotenoids. Annual
Review of Plant Biology 57, 711-738. PUBMED
Impact Factor: 18
(2006) Carotenoid
accumulation and function in seeds and non-green tissues. Plant,
Cell and Environment 29, 435-445. PUBMED
Impact Factor: 4
(2006) A mutation affecting
ascorbate peroxidase 2 gene expression reveals a link between responses to high
light and drought tolerance. Plant, Cell and Environment
29, 269-281. PUBMED
Impact Factor: 4
(2006)
Carotenoid Metabolism.
The Structure and Fuction of Plastids,
Advances in Photosynthesis and Respiration Series Springer Vol 23, pp315-334
Hoober, K and Wise, R. (eds)
ISBN: 978-1-4020-4060-3 URL.
(2006) Ordered
assembly of mitochondria during rice germination begins with promitochondrial
structures rich in components of the protein import apparatus.
Plant Molecular Biology
60, 201-23 PUBMED
Impact Factor: 3
(2006) Characterisation of Mitochondrial Alternative
NAD(P)H Dehydrogenases in Arabidopsis: Intraorganelle Location and Expression.
Plant & Cell Physiology 47:43-54. PUBMED
Impact Factor: 3
(2006) Alternative
Oxidases in Arabidopsis: a comparative analysis of differential expression in
the gene family provides new insights into function of non-phosphorylating bypasses.
Biochimica et Biophysica Acta - Bioenergetics
1757:730-41 PUBMED
Impact Factor: 4
(2006) Mitochondrial
protein import: convergent solutions for receptor structure. Current
Biology 16, R197-9. PUBMED
Impact Factor: 12
(2006) ModuleFinder
and CoReg: linking gene expression modules with promoter sequences motifs to
uncover gene regulation mechanisms in plants. Plant Methods 2, 8 PUBMED
(2006)
Similar protein phosphatases control starch metabolism
in plants and glycogen metabolism in mammals. Journal
of Biological Chemistry 281, 11815-8. PUBMED
Impact Factor: 6
(2006) Evidence for
distinct mechanisms of starch granule breakdown in plants. Journal
of Biological Chemistry 281, 12050-9. PUBMED
Impact Factor: 6
(2006) Chewing the fat: beta-oxidation in signalling
and development. Trends in Plant Science
11, 124-32. PUBMED
Impact Factor: 10
(2006) The
environmental plasticity and ecological genomics of the cyanobacterial CO2 concentrating
mechanism. Journal of Experimental Botany
57, 249-65 PUBMED
Impact Factor: 3
(2006) Sensing
of Inorganic Carbon Limitation in Synechococcus PCC7942 Is Correlated with the
Size of the Internal Inorganic Carbon Pool and Involves Oxygen. Plant
Physiology 139, 1959-69 PUBMED
Impact Factor: 6
2006 Statistics
- 27 publications
- 23 in ISI listed Journals
- No. Impact >5 <10 = 10
- No. Impact Factor >10 = 5
- Average Impact Factor = 6.5 (149/23)
Publications by Centre Staff - 2005
(2005) The
N-terminal cleavable extension of plant carrier proteins in responsible for
efficient insertion into the inner mitochondrial membrane. Journal
of Molecular Biology 351, 16-25 PUBMED
Impact Factor: 5
(2005) Combining experimental and predicted datasets for determination of the
subcellular location of proteins in Arabidopsis. Plant
Physiology 139, 598-609 PUBMED
Impact Factor: 6
(2005) Blue-Native
PAGE in Plants: a Tool in Analysis of Protein-Protein Interactions. Plant Methods 1, 11 PUBMED
(2005) Adaptations required for mitochondrial import
following mitochondrial to nucleus gene transfer of ribosomal protein S10. Plant
Physiology 138, 2134-44 PUBMED
Impact Factor: 6
(2005) Improved
survival of very high light and oxidative stress is conferred by spontaneous
gain-of-function mutations in Chlamydomonas. Biochimica
Biophysica Acta 1709:45-57 PUBMED
Impact Factor: 4
(2005) Dual targeting
is the rule for organellar aminoacyl-tRNA synthetases in Arabidopsis thaliana.
Proceedings of the National Academy of Sciences USA.
102:16484-16489. PUBMED
Impact Factor: 10
. (2005) GeneFarm,
structural and functional annotation of Arabidopsis gene and protein families
by a network of experts. Nucleic Acids Research
33, D641-6. PUBMED
Impact Factor: 8
(2005). Protein import into mitochondria: endosymbiotic
origins and functions today.
Molecular Membrane Biology
22, 87-100. PUBMED
Impact Factor: 4
(2005). The C-terminal region of TIM 17 links the
outer and inner mitochondrial membranes in Arabidopsis and is essential for
protein import. Journal of Biological Chemistry
280, 16476-16483. PUBMED
Impact Factor: 6
(2005).
Stress-induced co-expression of alternative respiratory
chain components in Arabidopsis thaliana.
Plant Molecular Biology
58, 193-212. PUBMED
Impact Factor: 3
(2005) Proteomic
assessment of an established yechnique for carboxysome enrichment from Synechococcus
PCC7942. Canadian Journal of Botany 83,
746-757. Impact Factor: 1
(2005) Regulation
of cyanobacterial CO2-concentrating mechanisms through transcriptional induction
of high-affinity-Ci transport systems.
Canadian Journal of Botany
83, 698-710. Impact Factor: 1
(2005) AMPDB:
The Arabidopsis Mitochondrial Protein Database. Nucleic
Acids Research 33, D605-D610. PUBMED
Impact Factor: 8
(2005) Response of mitochondria to light intensity
in the leaves of sun and shade species. Plant Cell
and Environment 28, 760-771. Impact Factor: 4
(2005) Sensitivity
of plant mitochondrial terminal oxidases to the lipid peroxidation product 4-hydroxy-2-nonenal
(HNE). Biochemical Journal 387, 865-870.
PUBMED
Impact Factor: 4
(2005).
Identification of proteins synthesised in rice coleoptiles
during prolonged anoxia. Annals of Botany
96:703-15. PUBMED
Impact Factor: 2
(2005) Differential Impact of environmental stresses
on the pea mitochondrial proteome. Molecular &
Cellular Proteomics 4:1122-1133 PUBMED
Impact Factor: 10
(2005) The roles of carotenoids in
photosystem II of higher plants In:
Photosystem II: The Light-Driven Water/Plastoquinone Oxido-reductase in Photosynthesis.
Advances in Photosynthesis and Respiration Series, Springer
Wydrzynski T. and Satoh (eds)
ISBN: 978-1-4020-4249-2 URL.
(2005) A simple chlorophyll fluorescence parameter
that correlates with the rate coefficient of photoinactivation of Photosystem
II. Photosynthesis Research 84, 43-9 PUBMED
Impact Factor: 2
(2005) AtcwINV3
and 6 are not invertases but are fructan exohydrolases with different substrate
specificities. Plant Cell and Environment
28, 432-443. Impact Factor: 4
(2005) Chloroplast alpha-amylase is not required
for breakdown of transitory starch in Arabidopsis leaves.
Journal of Biological Chemistry, 280, 9773-9779. PUBMED
Impact Factor: 6
(2005)
Peroxisomal citrate synthase catalyses an essential
step in the respiration of fatty acids during germination of Arabidopsis seeds
and is required to break dormancy. Plant Cell,
17, 2037-2048. PUBMED
Impact Factor: 11
2005 Statistics
- 25 publications
- 23 in ISI listed Journals
- No. Impact >5 <10 = 7
- No. Impact Factor >10 = 6
- Average Impact Factor = 6.2 (143/23)
Centre Publications
Chief Investigators
Personal Publications
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last modified: Mon Nov 2 14:54:13 2009




